Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853749.1_cds_XP_016512348.1_25001
CDS Infomation

[gene=LOC107829392] [db_xref=GeneID:107829392] [protein=zinc finger BED domain-containing protein RICESLEEPER 2-like] [protein_id=XP_016512348.1] [location=join(1777..3154,3248..3291)] [gbkey=CDS]
Sequence

ATGGCAAATGGTATTTGTAGGTGCTTACGTGAGTGGGGGATAAATAAGATCTTCACTGTC
ACAGTTGATAATGCAAGCTCAAATGATGTGACAGTAAAAGAATTGTCTAAGCAATTAACA
AAAATGGGAACTAATTTGATGAACGGTAATCACCTTCACGTGAGATGTATGGCTCACATC
ATGAATCTTGTGGTCCAGGATGGTTTAAAAGAATCTTCAGTGTCTATTGAACGTGTTAGG
CATGCAGTGAGATATGTTAGGCAGTCTCCTGCGAGGTTGAAGAGGTTTCAAGAATGTTTT
GATGATGAACAACTCAATTGTAAAAAAACTTTATGCTTGGATGTTCCAACTAGGTGGAAT
TCCACCTACTTGATGTTGCGTAGGGCTGTTGAATTTGAAAGTGCATTTTCACATTATGCT
TCTAGTGAAATTGGCCTAAGACATTATCTTGAGCATTCTTATATTGAAGTTGGAATTCCT
ACAGGTGAACTTTTGAGTAGTGATTGGGAGAATGTAAAAAGAATTACAAAGTTTCTTGAA
ATCTTTTATCTTCTTACTTTGAAAATTTCTGGATCACGTTATGTTACATCGAATATTCAT
TTTCTTGAAATTTGTGTGGTTGTTGTTTATTTGAAGCAATTGATAGCAAATGAAGATACA
GTTTTAAGTGAAATAGCAAAGAAGATGAAAGAAAAGTTTGATAAGTATTGGGGTGATCCA
GGGAAAATGAACAATATAATTTTCATCTCATGTATTTTGGATCCACGTTACAAGCTCGAA
TCAGTTGGCTATGCACTTGTAAAGATGTTTGGTCAAGATCTGGGGGCAACTATACAAGCA
GAAGTGAAGAAGTACATGACTTCATTATTTAGTGAGTATGTAAAGTCCGGCTCAAAAGGT
GTCGTGCTTGCTTCATCTTCAGATTGTTCTTCATTGAACACTTCTACTTCCGAGCTTTCT
GGAAGTCAAGTAAGCACCCAAAATACAGGACTTTTAGAATCACTCATGCAAGATATAAAA
AAATATAAAAGTGAAAGTGGAGGTGTGGATACTAGAATAGAGTTAGATAAATATTTTGGT
GAAGAAACTGAGGATGACACTAAAGAATTTGATGTTCTTCTCTGGTGGAAATTGAACTCA
GCTAGATTTCCTATTCTTGCGGAGATGGCTCGTGATGTATTAGCTGTTCCGGTTTCAAGT
GTGGTATCTGAATGTTCGTTTAGTACGGGAGGACGTCTTCTTGATTCATTTAGGAGTTCA
TTAACTCCTAAATTGGTGCAAGCTTTAGTGTGTCTTCAAGATTGGCTTAGAAATGAAAAA
TTAAAACAACCTGTTTGTGTTGAGGAAGATCTTGATAAAATCGAGCAGCTTGAACAAGAT
TTAGCTAGCGATGGAAAAGACCCTTCTGTAATTGACATGTAG

Peptide Sequence

PEP ID

XP_016512348.1
PEP Infomation

PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Nicotiana tabacum]
Sequence

MANGICRCLREWGINKIFTVTVDNASSNDVTVKELSKQLTKMGTNLMNGNHLHVRCMAHI
MNLVVQDGLKESSVSIERVRHAVRYVRQSPARLKRFQECFDDEQLNCKKTLCLDVPTRWN
STYLMLRRAVEFESAFSHYASSEIGLRHYLEHSYIEVGIPTGELLSSDWENVKRITKFLE
IFYLLTLKISGSRYVTSNIHFLEICVVVVYLKQLIANEDTVLSEIAKKMKEKFDKYWGDP
GKMNNIIFISCILDPRYKLESVGYALVKMFGQDLGATIQAEVKKYMTSLFSEYVKSGSKG
VVLASSSDCSSLNTSTSELSGSQVSTQNTGLLESLMQDIKKYKSESGGVDTRIELDKYFG
EETEDDTKEFDVLLWWKLNSARFPILAEMARDVLAVPVSSVVSECSFSTGGRLLDSFRSS
LTPKLVQALVCLQDWLRNEKLKQPVCVEEDLDKIEQLEQDLASDGKDPSVIDM

Transcript Sequence

Gene sequence data has not been registered.